sw-gpu
2016-08-23
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Efficient implementation of Smith-Waterman algorithm in CUDA and OpenCL.
So far I've released CUDA kernels but other parts (like command line tool to run the kernel and OpenCL kernel for ATI hardware) of the program will follow soon... ;)
for GPU-GEMS kernels see Downloads
python
opencl
cuda
Bioinformatics
GPU
GPGPU
Smith-Waterman
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