jmzreader
2016-08-23
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jmzReader - Easily Accessing Peak List Files
General
The jmzReader library is a collection of Java APIs to parse the most commonly used MS peak list formats. Currently, the library contains parsers for * dta * mgf * ms2 * mzData * mzXML * pkl * mzML * PRIDE XML
All parsers are optimized to be used in conjunction with mzIdentML (see link in the left panel).
Based on a custom build class to efficiently parse text files line by line all parsers can handle arbitrary large files in minimal memory, allowing easy and efficient processing of peak list files using the Java programming language. mzIdentML files do not contain spectra data but refer to external peak list files. All peak list parsers support the metho
java
Academic
Bioinformatics
EMBL-EBI
massspectrometry
PRIDE
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